Microbiology:


Genetic Engineering of Microorganisms for Biotechnology
Viral, Fungal and Bacterial Pathogenesis
Environmental Sensing and Development in Microbes
Microbial Genomics

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Microbiology, Immunology, and Cancer Biology Graduate Program


MICROBIOLOGY TRACK

The University of Minnesota has a longstanding tradition of excellence in microbiology research and education. The Microbiology Track faculty of the Microbiology, Immunology and Cancer Biology Graduate program draws its membership of preeminent virologists, bacteriologists and mycologists from a diversity of academic departments. The Microbiology Track faculty is an exciting and dynamic community of scholars and distinguished investigators engaged in research at the forefront of areas including microbial pathogenesis, regulation of viral gene expression, molecular genetics, cell signaling. Major initiatives in the development of state-of-the-art microbial genomics and proteomics centers attest to our commitment to the advancement of the innovative research strategies that are the hallmark of our program. Microbiology Track faculty research activities are strongly supported by both public and private funding agencies. In addition, highly productive industry collaborations include projects focused on bioremediation as well as the development of novel drugs and vaccines for the treatment of infectious diseases and cancer.

The Microbiology Track offers students a challenging educational experience in a stimulating and nurturing environment. We are committed to providing outstanding scientific training to graduate students in the areas of scientific method and critical thought, and to serving as mentors for the intellectual development required for advanced study and research. We invite you to join us to pursue your scientific interests and advance your career goals as a member of our research community.

FACULTY RESEARCH

The Microbiology Track faculty are engaged in research aimed at answering questions of wide biological interest.


Viral Pathogenesis

  • What are the cellular and viral determinants controlling the entry of viruses into host cells, viral particle assembly, replication and packaging?
  • How is viral persistence in the host initiated and maintained?
  • What is the mode of sexual mucosal transmission of HIV and what is the profile of viral gene expression in host cells?
  • What factors control herpes simplex virus lytic and latent infections?
  • What factors enable viruses to replicate efficiently in the face of host antiviral defense mechanisms, including interferons?

Faculty Researchers
Anderson, Conklin, Haase, Rice, Schiff, Southern


Bacterial Pathogenesis

  • How do microbial pathogens sense the environmental changes associated with the transition from the free-living state to the parasitic state within a host?
  • How do the molecular properties of related toxin superantigens produced by Staphylococcus aureusand group A streptococci correlate with their distinct biological activities?
  • What are the important virulence factors produced by the opportunistic pathogen Burkholderia cepacia and how is expression of those factors controlled at the genetic level?
  • What is the role of components of the cell wall in enterococcal endocarditis?
  • What are the molecular and cellular processes that lead to the persistent streptococcal infection associated with pathology?
  • How is the expression of genes encoding multiple iron transport systems of Bordetella pertussisprioritized and regulated within the host respiratory tract environment during the course of infection?

Faculty Researchers
Armstrong, Cleary, Das, Dunny, Kapur, Mohr, Schlievert, Schottel, Wells


Fungal Pathogenesis

  • How does chromosome structure and chromatin assembly control cellular morphogenesis and how is this related to senescence, or 'aging'?
  • What are the signals to which cells respond to undergo the physiological changes associated with senescence?
  • What are the virulence factors that enable fungi such as Candida albicans to cause disease?
  • How does the dynamic organization of the C. albicans genome relate to the pathogenic potential of this fungus?
  • What is the role in vivo of the recently discovered mating reaction in C. albicans?
  • How does the genome control the response to environmental signals that stimulate different morphogenetic responses in C. albicans and other fungi?

Faculty Researchers
Berman, Davis, Magee, Wells


Environmental sensing and development in microbes

  • How do bacteria perceive changes in their environment and what are the molecular mechanisms used to translate those perceptions into appropriate cellular responses?
  • How do bacterial pathogens such as Bordetella pertussis and Enterococcus faecalis engage in cell-cell communication, and what is the outcome of this signaling?
  • How is the conjugative transfer of an enterococcal antibiotic resistance plasmid controlled by a peptide pheromone produced by the recipient cell?
  • What Rhizobium and Bradyrhizobium genes are involved in host/microbe recognition and in the establishment of symbiotic, nitrogen-fixing nodules in plants?

Faculty Researchers
Armstrong, Das, Davis, Dunny, Sadowsky, Schlievert, Wackett


Microbial genomics

  • How can information derived from microbial genomic sequences be used to discover new drug targets and to study the organism's biology and metabolism?
  • Which viral and bacterial genes are transcribed preferentially in the host or under certain laboratory culture conditions?

Faculty Researchers
Berman, Cleary, Davis, Dunny, Haase, Kapur, Ellis, Magee, O'Sullivan, Rice, Schiff, Schlievert, Wackett


Genetic engineering of microorganisms for biotechnology

  • In what ways can the physiology and genetics of lactococci be manipulated to improve the strains used in the food industry?
  • How can molecular biology technology be used to study microbial metabolism as well as to construct novel biodegradation pathways to allow bacteria to degrade environmental pollutants?
  • How can bacteria and fungi be used to dissect the biosynthetic pathways for natural products such as antibiotics and chemotherapeutic agents such as the anti-cancer agent mitomycin C?
  • How can bifidobacteria be manipulated to improve their competitiveness in the human large intestine?

Faculty Researchers
McKay, O'Sullivan, Sadowsky, Wackett


LINKS TO SELECTED UNIVERSITY OF MINNESOTA CENTERS AND PROGRAMS
Actinomycetes-Streptomyces Internet Resource Center
Advanced Genetic Analysis Center
Biomedical Genomics Center
Biological Process Technology Institute
Center for Biodegradation Research and Informatics
Center for Microbial Genomics
Quantitative Image Analysis and Single-Cell Technology Virology Core Laboratory
The University of Minnesota Biocatalysis/Biodegradation Database

OTHER LINKS OF MICROBIOLOGICAL INTEREST
American Society for Microbiology
Great Lakes Center For AIDS Research
National Center for Biotechnology Information (NCBI)
NCBI Sequenced Microbial Genomes
The Candida albicans Web Site
The Center for Biofilm Engineering
The Institute for Genomic Research (TIGR)
TIGR Microbial Genome Database
The Quorum Sensing Site